Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939679.1_cds_XP_016484170.1_75210
CDS Infomation

[gene=LOC107804758] [db_xref=GeneID:107804758] [protein=peptidyl-prolyl cis-trans isomerase FKBP42-like] [protein_id=XP_016484170.1] [location=complement(join(2133..2459,2547..2699,2799..2921,3004..3188,3545..3634,5172..5354,6093..6138))] [gbkey=CDS]
Sequence

ATGGCTGAAGTGGAAGAGGAGCAGCAGCAGCAGAAATTATCAGTAGATCAGGGTGGTACT
GACGAAATCATCACTGAAGGCGCTTCAGTTGTTCATGGAGAACCTCCACAGGATGATACT
GGGCCACCAAAAGTTGATTCAGAAGTGGAATTCCTCCATGAAAAAGTAACCAAGCAGATC
ATTAAAGAAGGTCATGGTCAGAAGCCAACGAAATACGCAACATGCTTCTTGCATTACAGG
GCATGGACTGAAAGCACCCAGCACAAGTTTGAAGATACATGGCATGAACAACAACCCCTT
GAGCTGGTTATAGGAAAAGAGAAAAAGGAAATGACTGGCCTCGCTATTGGCGTTAACAGC
ATGAAATCCGGTGAGCGTGCTCTATTGCATGTTGGCTGGGAACTCGCCTATGGAAAAGAA
GGAAGCTTCTCTTTCCCTAATGTCCCACCTACAGCTGATGTTTTGTACGAAGTCGAGTTG
ATTGGCTTCGATGAGACCGGAGAAGGTAAAGCACGGGGTGACATGACAGTAGAGGAGAGG
ATTGGGGCAGCAGATAGAAGAAAGATGGATGGAAATGCTTTATTCAAGGAGGAGAAACTT
GAGGAGGCTATGCAACAGTATGAAATGGCCATTGCATATATGGGAGATGACTTCATGTTT
CAGCTGTTTGGTAAGTTCCGGGACATGGCCTTAGCAGTAAAGAACCCATGCCATCTTAAC
ACGGCTGCTTGCCTGCTGAAACTCCAGCGGTATGATGAAGCCATTGCTCAATGTAGCATT
GTCCTAGCGGAAGATGAGAACAATGTAAAAGCATTGTTTAGACGTGGAAAGGCTAGAGCT
ATACTTGGTCAGATCGATGCAGCTCGTGAAGACTTTCTGAAAGCACGCAAGTTTGCCCCG
CAAGACAAAGCCATTGCTAGAGAATTGCATTTAATTGCAGAACATGAGAAGGCTGTCTAT
CAAAAACAAAAGGAACTTTACAAAGGACTATTTGGACCAAGACCAGAGCCTAAACCAAAG
TCGAAAAACTGGCTGATTGTCATTTGGCAATGGCTGTTGTCACTCTTCTATCTGCTTTTC
AGGCGTAAGGCGCGCAAGGATGACTAA

Peptide Sequence

PEP ID

XP_016484170.1
PEP Infomation

PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42-like [Nicotiana tabacum]
Sequence

MAEVEEEQQQQKLSVDQGGTDEIITEGASVVHGEPPQDDTGPPKVDSEVEFLHEKVTKQI
IKEGHGQKPTKYATCFLHYRAWTESTQHKFEDTWHEQQPLELVIGKEKKEMTGLAIGVNS
MKSGERALLHVGWELAYGKEGSFSFPNVPPTADVLYEVELIGFDETGEGKARGDMTVEER
IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKFRDMALAVKNPCHLN
TAACLLKLQRYDEAIAQCSIVLAEDENNVKALFRRGKARAILGQIDAAREDFLKARKFAP
QDKAIARELHLIAEHEKAVYQKQKELYKGLFGPRPEPKPKSKNWLIVIWQWLLSLFYLLF
RRKARKDD

Transcript Sequence

Gene sequence data has not been registered.